GitHub - saezlab/decoupleR: R package to infer biological activities ...
There are many methods that allow us to extract biological activities from omics data. decoupleR is a Bioconductor package containing different statistical methods to extract biological signatures from …
decoupleR: Ensemble of computational methods to infer biological ...
There are many methods that allow us to extract biological activities from omics data. decoupleR is a Bioconductor package containing different statistical methods to extract biological signatures from …
decoupler - Ensemble of methods to infer enrichment scores
decoupler is a python package containing different enrichment statistical methods to extract biologically driven scores from omics data within a unified framework.
Bioconductor - decoupleR
Here, we present decoupleR, a Bioconductor package containing different statistical methods to extract these signatures within a unified framework. decoupleR allows the user to flexibly test any method …
decoupleR: ensemble of computational methods to infer biological ...
Mar 8, 2022 · In summary, decoupleR combines a variety of methods to infer biological activities into one efficient, robust, and user-friendly tool in the two most used programming languages for omics …
GitHub - scverse/decoupler: Python package to perform enrichment ...
decoupler is a python package containing different enrichment statistical methods to extract biologically driven scores from omics data within a unified framework.
Introduction • decoupleR - GitHub Pages
decoupleR needs a matrix (mat) of any molecular readouts (gene expression, logFC, p-values, etc.) and a network that relates target features (genes, proteins, etc.) to “source” biological entities (pathways, …
decoupleR: decoupleR: Ensemble of computational methods to infer ...
Apr 1, 2022 · Here, we present decoupleR, a Bioconductor package containing different statistical methods to extract these signatures within a unified framework. decoupleR allows the user to flexibly …
Single-cell Enrichment Analysis — decoupler
In this notebook, we demonstrate how to use decoupler to infer transcription factor (TF) and pathway enrichment scores from a scRNA-seq human dataset. The dataset includes 3k peripheral blood …
decoupleR
There are many methods that allow us to extract biological activities from omics data. decoupleR is a Bioconductor package containing different statistical methods to extract biological signatures from …