Microscopy plays a pivotal role in modern biomedical research, enabling the visualization of fine structures in complex specimens. Fourier ptychographic microscopy (FPM) is a computational imaging ...

ABSTRACT: Spatial transcriptomics is undergoing rapid advancements and iterations. It is a beneficial tool to significantly enhance our understanding of tissue organization and relationships between ...

it is running well on A100, but when I run it on B200, it throw a exception below. I search about this, not sure, looks like Cellpose's GPU acceleration module has not been updated to support the ...

Leica Microsystems released Aivia 15, the latest version of its AI-driven image analysis software for microscopy. The update includes tools for 2D and 3D cell segmentation powered by deep learning, ...

At the University of Tartu and CSIRO, researchers developed Kaizen, a new imaging method that predicts and refines cell boundaries in crowded microscope images By iteratively updating an internal ...

The Cellpose3 restoration algorithm, when applied to distorted images, produces crisp restored images which can then be easily segmented by the original Cellpose segmentation algorithm. Picking out ...

In a recent study published in the journal Nature, researchers developed spatial aging clocks using single-cell transcriptomics to explore cell-type-specific interactions and their impact on brain ...

Abstract: Although deep learning and computer vision based approaches have demonstrated success in the field of cell counting and detection in microscopic images, they continue to have certain ...

Cell segmentation and classification are vital tasks in spatial omics data analysis, which provides unprecedented insights into cellular structures and tissue functions. Recent advancements in spatial ...

I am trying to use CellPose extension in QuPath to train a model for my tissues. I am using QuPath 0.5.1 with CellPost extension 0.9.3. I used 2 images, both annotated with 2 “training” and 2 ...